Here are some tools that allow the conversion to BiBTeX format from various sources.
DOI to .bib
We can use the command line to convert this DOI (10.1101/gr.6339607) to the .bib format:
curl -LH "Accept: text/bibliography; style=bibtex" http://dx.doi.org/10.1101/gr.6339607 @article{Gerstein_2007, title={What is a gene, post-ENCODE? History and updated definition}, volume={17}, ISSN={1088-9051}, url={http://dx.doi.org/10.1101/gr.6339607}, DOI={10.1101/gr.6339607}, number={6}, journal={Genome Research}, publisher={Cold Spring Harbor Laboratory Press}, author={Gerstein, M. B. and Bruce, C. and Rozowsky, J. S. and Zheng, D. and Du, J. and Korbel, J. O. and Emanuelsson, O. and Zhang, Z. D. and Weissman, S. and Snyder, M.}, year={2007}, month={Jun}, pages={669-681}}
We can also use the doi2bib webtool; copying and pasting the DOI returns:
@article{Gerstein2007, doi = {10.1101/gr.6339607}, url = {http://dx.doi.org/10.1101/gr.6339607}, year = {2007}, month = {Jun}, publisher = {Cold Spring Harbor Laboratory Press}, volume = {17}, number = {6}, pages = {669-681}, author = {M. B. Gerstein and C. Bruce and J. S. Rozowsky and D. Zheng and J. Du and J. O. Korbel and O. Emanuelsson and Z. D. Zhang and S. Weissman and M. Snyder}, title = {What is a gene, post-ENCODE? History and updated definition}, journal = {Genome Research} }
PubMed ID to .bib
The TeXMed tool converts PubMed IDs to .bib. Copying and pasting 17567988 returns:
@Article{pmid17567988, Author="Gerstein, M. B. and Bruce, C. and Rozowsky, J. S. and Zheng, D. and Du, J. and Korbel, J. O. and Emanuelsson, O. and Zhang, Z. D. and Weissman, S. and Snyder, M. ", Title="{{W}hat is a gene, post-{E}{N}{C}{O}{D}{E}? {H}istory and updated definition}", Journal="Genome Res.", Year="2007", Volume="17", Number="6", Pages="669--681", Month="Jun" }
RIS to .bib
The Nature Publishing Group provides a citation button for their articles, however they only return in RIS format (for some reason). Here's the RIS format for an article published recently in Nature:
TY - JOUR AU - Major, J. D. AU - Treharne, R. E. AU - Phillips, L. J. AU - Durose, K. TI - A low-cost non-toxic post-growth activation step for CdTe solar cells JA - Nature PY - 2014/06/25/online VL - advance online publication SP - EP - PB - Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. SN - 1476-4687 UR - http://dx.doi.org/10.1038/nature13435 L3 - 10.1038/nature13435 M3 - Letter ER -
I found this blog that shows how to use bibutils to convert between the two formats.
#download and compile bibutils wget http://sourceforge.net/projects/bibutils/files/bibutils_5.4_src.tgz tar -xzf bibutils_5.4_src.tgz cd bibutils_5.4 ./configure --install-dir bin2 --install-lib bin2 make && make install #I saved the RIS format in a file called cit.ris #convert from ris to xml to bib bin/bin2/ris2xml cit.ris | bin/bin2/xml2bib > cit.bib cat cit.bib { @Article{Major2014, author="Major, J. D. and Treharne, R. E. and Phillips, L. J. and Durose, K.", title="A low-cost non-toxic post-growth activation step for CdTe solar cells", journal="Nature", year="2014", month="Jun", day="25", publisher="Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved.", volume="advance online publication", note="Letter", issn="1476-4687", url="http://dx.doi.org/10.1038/nature13435" } #there are also other utilities from bibutils ls -1 bin/bin2 bib2xml biblatex2xml copac2xml ebi2xml end2xml endx2xml isi2xml med2xml modsclean ris2xml wordbib2xml xml2ads xml2bib xml2end xml2isi xml2ris xml2wordbib
ISBN to .bib
The webtool OttoBib converts ISBN to .bib. Inputting 978-0451524935 (select the BibTeX radio button) returns:
@Book{orwell19611984, author = {Orwell, George}, title = {1984 : a novel}, publisher = {Signet Classic}, year = {1961}, address = {New York, N.Y}, isbn = {978-0451524935} }
Google Scholar
Google Scholar can export articles to .bib; just click the "cite" link and then "Import into BibTeX". For example, when viewing this search, clicking cite and Import into BibTeX from the top result returns:
@article{gerstein2007gene, title={What is a gene, post-ENCODE? History and updated definition}, author={Gerstein, Mark B and Bruce, Can and Rozowsky, Joel S and Zheng, Deyou and Du, Jiang and Korbel, Jan O and Emanuelsson, Olof and Zhang, Zhengdong D and Weissman, Sherman and Snyder, Michael}, journal={Genome research}, volume={17}, number={6}, pages={669--681}, year={2007}, publisher={Cold Spring Harbor Lab} }
This work is licensed under a Creative Commons
Attribution 4.0 International License.
There are also several online tools for RIS to bibtex. Since many people may be reluctant to command line tools, they may be worth mentioning!
xml2bib doesnt work :'(