Computational biology and genomics
For running RStudio Server in a container, I’ve written about how to run RStudio Server with Docker; in the post I also listed out some reasons why you would want to do that instead of simply installing RStudio on your computer. This post demonstrates one way of running RStudio Server with Singularity. I learned that…
Last updated: 2023/07/28 I recently learned about code snippets in RStudio (ignore the strikethrough). As the name suggests, they are snippets of code that you can quickly insert into your source code in the source pane of RStudio. There are two ways to add code snippets: Click on the following: Tools -> Global Options ->…
Last updated: 2023/02/28 Recently I have gotten several messages from users having problems with running RStudio Server with the latest R version (4.2.2) from The Rocker Project. The latest RStudio Server image is based on r-ver:4.2.2, which is based on ubuntu:jammy (Ubuntu 22.04). The RStudio Server image for r-ver:4.2.0 is based on ubuntu:focal (Ubuntu 20.04)….
I recently purchased an ASUS Chromebook as I wanted an affordable and portable (lightweight and decent battery life) laptop. The Chromebook can run Linux (Debian by default) using ChromeOS’s Linux development environment, so it essentially has everything I need for work. RStudio is an essential tool for my work and I could install and use…
Last updated: 2024/05/30 If you are running into problems with using RStudio Server and R version 4.2.2, I wrote a new blog post about it. I highly recommend using RStudio if you use R because it makes working with R so much easier. I primarily use RStudio for writing up my analyses in R Markdown….