Bioinformatics

From Dave's wiki
Jump to navigation Jump to search

Essential tools

http://mama.indstate.edu/users/ice/tree/

Conda environment file

name: seq
channels:
  - bioconda
  - anaconda
  - conda-forge
  - defaults
dependencies:
  - bwa
  - samtools
  - bedtools
  - deeptools
  - minimap2
  - fastp
  - parallel
  - seqtk
  - bcftools
  - vcftools
  - csvkit

Licensing